diff --git a/crates/ide-run/src/detect.rs b/crates/ide-run/src/detect.rs
index acb7e87dc..b7bc88027 100644
--- a/crates/ide-run/src/detect.rs
+++ b/crates/ide-run/src/detect.rs
@@ -564,9 +564,8 @@ fn spring_boot_apps(root: &Path, build: &Path, out: &mut Vec<RunConfig>) {
                 Some(m) => format!("application:{m}:{class}"),
                 None => format!("application:{class}"),
             };
-            let mut app = config(id, simple, "spring-boot", "java", &["-cp", "${classpath}", &class])
-                .in_dir(module_rel.as_ref().map(PathBuf::from))
-                .debug("java-debug");
+            let mut app =
+                config(id, simple, "spring-boot", "java", &["-cp", "${classpath}", &class]).debug("java-debug");
             app.extras.module = Some(module_rel.clone().unwrap_or_default());
             out.push(app);
         }
diff --git a/crates/ide-run/tests/detect.rs b/crates/ide-run/tests/detect.rs
index 80e54c385..aebe520c2 100644
--- a/crates/ide-run/tests/detect.rs
+++ b/crates/ide-run/tests/detect.rs
@@ -215,7 +215,7 @@ fn builds_nested_in_a_folder_of_repositories() {
     assert_eq!(app.name, "DromaraApplication");
     assert_eq!(app.kind, "spring-boot");
     assert_eq!(cmdline(app), "java -cp ${classpath} org.dromara.DromaraApplication");
-    assert_eq!(app.cwd.as_deref(), Some(Path::new("RuoYi-Vue-Plus/ruoyi-admin")));
+    assert_eq!(app.cwd, None);
     assert_eq!(app.extras.module.as_deref(), Some("RuoYi-Vue-Plus/ruoyi-admin"));
     assert_eq!(app.debug_adapter.as_deref(), Some("java-debug"));
     let package = find(&c, "maven:package:RuoYi-Vue-Plus");
@@ -258,7 +258,7 @@ fn spring_boot_application_of_a_repository_nested_one_or_two_levels_down() {
         let module = format!("{prefix}ruoyi-ai/ruoyi-admin");
         let app = find(&c, &format!("application:{module}:org.ruoyi.RuoYiAIApplication"));
         assert_eq!((app.name.as_str(), app.kind.as_str()), ("RuoYiAIApplication", "spring-boot"), "{prefix}");
-        assert_eq!(app.cwd.as_deref(), Some(Path::new(&module)));
+        assert_eq!((app.cwd.as_deref(), app.extras.module.as_deref()), (None, Some(module.as_str())), "{prefix}");
         assert!(ids(&c).contains(&format!("maven:spring-boot:run:{prefix}ruoyi-ai").as_str()), "{prefix}");
     }
 }
@@ -295,9 +295,9 @@ fn nested_builds_of_every_kind_and_depth() {
     }
     assert!(find(&c, "gradle:test:services/api").is_test);
     let api = find(&c, "application:services/api/app:com.acme.ApiKt");
-    assert_eq!(api.cwd.as_deref(), Some(Path::new("services/api/app")));
+    assert_eq!((api.cwd.as_deref(), api.extras.module.as_deref()), (None, Some("services/api/app")));
     let billing = find(&c, "application:billing:Billing");
-    assert_eq!(billing.cwd.as_deref(), Some(Path::new("billing")));
+    assert_eq!((billing.cwd.as_deref(), billing.extras.module.as_deref()), (None, Some("billing")));
     let builds: Vec<&str> =
         ids(&c).into_iter().filter(|id| id.starts_with("maven:package") || id.starts_with("gradle:build")).collect();
     assert_eq!(builds, ["gradle:build:services/api", "maven:package:billing"]);
diff --git a/src/features/run/application.ts b/src/features/run/application.ts
index b77cc1f00..8c9ae40c5 100644
--- a/src/features/run/application.ts
+++ b/src/features/run/application.ts
@@ -34,7 +34,7 @@ export function applicationConfig(
     kind: target.spring ? "spring-boot" : "application",
     command: "java",
     args: ["-cp", isTestSource(relPath) ? TEST_CLASSPATH : CLASSPATH, target.className],
-    cwd: module || null,
+    cwd: null,
     module,
     env: {},
     detected: true,
diff --git a/src/features/run/java.test.ts b/src/features/run/java.test.ts
index f74d3e7ec..5c74648ba 100644
--- a/src/features/run/java.test.ts
+++ b/src/features/run/java.test.ts
@@ -224,7 +224,8 @@ describe("application configurations", () => {
     });
     expect(applicationConfig({ className: "a.Tool" }, "m/src/test/java/a/Tool.java")).toMatchObject({
       kind: "application",
-      cwd: "m",
+      module: "m",
+      cwd: null,
       args: ["-cp", "${testClasspath}", "a.Tool"],
     });
   });
diff --git a/src/features/run/producers.test.ts b/src/features/run/producers.test.ts
index 21574434e..4c3812cf1 100644
--- a/src/features/run/producers.test.ts
+++ b/src/features/run/producers.test.ts
@@ -425,7 +425,7 @@ describe("single-file producers (scratches)", () => {
     });
     expect(produceContext(input(), ALL)!.config!.kind).toBe("java-file");
     const p = produceContext(input(["/work/billing", svc]), ALL)!;
-    expect(p.config).toMatchObject({ kind: "spring-boot", module: svc, cwd: svc });
+    expect(p.config).toMatchObject({ kind: "spring-boot", module: svc, cwd: null });
     expect(p.config!.args).toEqual(["-cp", "${classpath}", "com.example.ShopApplication"]);
   });
 
@@ -487,7 +487,8 @@ describe("single-file producers (scratches)", () => {
             kind: "spring-boot",
             name: "DromaraApplication",
             command: "java",
-            cwd: module,
+            module,
+            cwd: null,
           });
           expect(p!.config!.args).toEqual(["-cp", "${classpath}", "org.dromara.DromaraApplication"]);
         }
@@ -503,7 +504,7 @@ describe("single-file producers (scratches)", () => {
     it("Kotlin and test classes use the build that contains them", () => {
       const kt = "package demo\n\nfun main() {\n  println(1)\n}\n";
       const p = produceContext(at("backend/app/src/main/kotlin/demo/App.kt", nested("gradle", "backend"), kt, 3), ALL)!;
-      expect(p.config).toMatchObject({ kind: "application", cwd: "backend/app" });
+      expect(p.config).toMatchObject({ kind: "application", module: "backend/app", cwd: null });
       expect(p.config!.args.at(-1)).toBe("demo.AppKt");
       const test = "package demo;\nclass AppTest {\n  @Test\n  void works() {\n  }\n}\n";
       const t = produceContext(